Research Orientation for PY410: Senior Seminar Class
Fall 2009

Professor: Alain Brizard
Reference/Instruction Librarian: Steven Burks

Office:
Library 210

Phone
: ext 2354

Email
: sburks@smcvt.edu

My Reference Hours
: Variable, I  work Tuesday evenings 7:30 - 9:30pm this semester.

Appointments:
Contact me via phone or email sburks@smcvt.edu

Chemical synthesis
www.phog.physik.uni-mu
enchen.de/.../index.html

PhotoPhysics: The study and application of the photophysics of molecular fluorescence in condensed media. Current research is focused on biomedical sensing, sol-gel nanoparticle structure and dynamics, nanotomography using fluorescence resonance energy transfer, single molecule studies and developing ultrafast techniques such as multiphoton excitation.
http://sensor.phys.strath.ac.uk

 

 
Research Orientation Coverage


 
Example Search Statement

The following simple search statement can be broken down to searchable terms.  Each term can be broken down to synonymous, broader, or narrower terms.

Photoinduced Electron Transfer in
Intercalated DNA

                                         
Searchable
Terms
can be
combined by
the Boolean
term AND
 
Photoinduced Electron Transfer
photoinducing
photoex-citation
photochemical reaction

oxidative damage
Marcus Theory  
DNA            
Deoxyribonucleic acid

Intercalated
intercalation
intercalator
metallointercalator
Intercalating Agents
There can be many possible searches using the above terms in computer database searching.  For example:

photoin* AND intercala* AND (dna OR deoxyribonucleic acid) - Academic Search Premiere

photoin* AND "electron transfer" AND (dna OR deoxyribonucleic acid) - Academic Search Premiere

(photoin* AND "electron transfer" AND (dna OR deoxyribonucleic AND acid)- Medline

Photoinduced Electron Transfer AND Intercalated DNA -Medline

The Boolean Term AND narrows your search
The Boolean Term OR broadens your search
Truncation symbols for different databases   (?, *, !) will provide variant spelling after the root word. 
For Example: gene* = gene, genes, genetics, 

                                                               

There can be many possible searches using the above terms in computer database searching. 

The Boolean Term AND narrows your search
The Boolean Term OR broadens your search
Truncation symbols for different databases   (?, *, !) will provide variant spelling after the root word. 
For Example: gene* = gene, genes, genetics, 

 

Reference Materials

Reference Materials Reference Materials in the Sciences can be found in the section: Q to T.  This can be a good place to look for science specific encyclopedias or dictionaries, statistical sources, Internet guides, and research guides in different areas of the sciences.  Some sources to start with:

Access Science- Physics   See PhotoInduced Electron Transfer  See Intercalated DNA
Published by McGraw Hill Encyclopedia of Science & Technology.  Excellent authoritative science articles authored by experts in their fields.  Includes dictionary and full length articles.

Dictionary of Physics
REF QC5 .D53 2004

Encyclopedia of physics /
REF QC5 .R596 2004

Encyclopedia of the solar system
REF QB501 .E53 2007

Encyclopedia of weather and climate
REF QC854 .A45 2007

Encyclopedia of Spectroscopy and Spectrometry
Published by Academic Press, this encyclopedia provides a comprehensive and up-to-date explanation of the most important spectroscopic and related techniques together with their applications.
 
[REF QC450.3 .E53 2000].

CRC Handbook of Chemistry and Physics
REF QD 65 .h3 2009-10

Statistical Record of the Environment
REF TD 180 .S73 1994

Britannica Online
The Encyclopaedia Britannica full text and updated containing external hyperlinks to the Internet.

Searching the SMC Online Catalog:
Subject and Keyword Searching  

SMC Library Catalog

*Note -- We often will order books on your research subject.  Just contact me.

Other Library Catalogs: UVM*, WorldCat

*Note -- SMC students may take books out from UVM with their KnightCard.

WorldCat  The OCLC Online Union Catalog, containing over 50 million records of books, Web resources, and other material owned by libraries worldwide. It is the the world's largest database of bibliographic information, and represents 4,000 years of recorded history.

Searching for Books and Materials in the Library Catalog using Subject and Keyword Searching: [Use the LCSH: Library of Congress Subject Headings to find subject headings]

Searching for Books and Materials in the Library Catalog using Subject and Keyword Searching: [Use the LCSH: Library of Congress Subject Headings to find subject headings]

**SUBJECT SEARCHING (FOR BOOKS) - possible headings (not exhaustive)
Choose FIND, then SUBJECT
1. Photochemistry
2. Organic photochemistry.
3. Photobiology.
4.  Electron transfer reaction.
See: Oxidation-reduction reaction.
5. DNA

 


Science Indexes and Full-text Databases Truncation symbols for different databases   
Science Indexes and Full text Databases

Truncation symbols for different databases   

 

Databases by Subject - Physics

See other subject databases for Chemistry, Biology, etc @
http://www.smcvt.edu/library/subject/default.asp

 

  • See Physics MetaSearch from link above


ScienceDirect Top 25 Hottest Articles by Subject


 
Forward Citing

Example : Find who cited the following article below:

Shchedrina, V., Novoselov, S., Malinouski, M., & Gladyshev, V. (2007, August 28). Identification and characterization of a selenoprotein family containing a diselenide bond in a redox motif. Proceedings of the National Academy of Sciences of the United States of America, 104(35), 13919-13924. Retrieved September 10, 2008, doi:10.1073/pnas.0703448104 

Use the following Citation [See Results]

  • Google Scholar - .  Look for the "Cited by" function (below the article) that links from a source to other sources referencing that source.
     
  • PUB/MED (free government site) - Search for your article.  Look for the Links link to the right of the article.   From the pull-down menu, choose Cited in PMC
     
  • ISI Web of Science  -  SMC does not have access to this citation source.  UVM does though.  You are welcome to use their to access Web of Science at their libraries. 
     
  • Science Direct database has forward citing for its articles
     
  • SciFinder Scholar  - Click on the "citing" tab under the article record to retrieve articles that site your article

Also - Some journal publishers and journal databases are now providing forward citing of article from their website.  For example, see Proceedings of the National Academy of Sciences of the United States of America.  Other publishers that offer advanced searching on their journals include Science and Nature

 

F. Assignment in Class -

The following Questions (1-5 )  refer to the journal article:
Shchedrina, V., Novoselov, S., Malinouski, M., & Gladyshev, V. (2007, August 28). Identification and characterization of a selenoprotein family containing a diselenide bond in a redox motif. Proceedings of the National Academy of Sciences of the United States of America, 104(35), 13919-13924. Retrieved September 10, 2008, doi:10.1073/pnas.0703448104 

1.  Use the Periodical Title Abbreviations in the Reference Section (REF Z 6945 .A2 ) or PubMed @ http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=journals to answer the following question

What are the full journal titles of the abbreviations from the following references cited in the above article. 

-- #1

-- #12

 

2. Find out if the SMC and UVM Libraries carries the journal issue cited in the following references.   Give the years the journal is carried at each institution.

-- #1

-- #12

-- #46

 

3. Give a citation of the PNAS article using APA or ACS format.  Use two methods - RefWorks and the citation from the database.

a). --

b) --


 

4. Give a citation # and title from the References list of the article that is a book, not a journal.   Explain how you can tell the difference.

A) Does SMC or UVM have the book?

 

5. Find journal articles that cite the article given for Citation #1

(Use Google Scholar and PubMed)

a) How many times is citation #1 cited in Google Scholar?

b) How many times is citation #1 cited in Pub/Med?

 


6. Write out a search statement in sentence form that you might consider for your Research Proposal.  Note - You may change your topic later after conferring with Professor Brizard   

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Identify the two or three main concepts in your search statement and break them down into synonymous, narrower, or broader terms:

Concept 1                 and        Concept 2            and       Concept 3
1                                             1                                       1

2                                             2                                       2

3                                             3                                       3

For the above search statement find a total of 8 sources that could be used for your research:
1)   - 1 reference sources (statistics, subject encyclopedias, other)
2)   - 1 book sources or (videos, maps, software) from SMC Library Collection or WorldCat or UVM
3)   - 4 Journal, Magazine, or Newspaper articles 
   A. 3 of the 4 must be a peer reviewed research article
   B. Determine if SMC Library has the Journal (electric or print)

Required: Use RefWorks to get ACS citations for your journal articles

4)   - 1 Internet sources on your topic
Required: Print out the first page of the Internet Source
Summarize each site -- write a brief description of what is at the site
Briefly evaluate each site - by authority, objectivity, timeliness, focus
(Review Evaluating Information @ http://lib.nmsu.edu/staff/susabeck/evalcrit.html

5) - List 2 points about the research process or this assignment that was frustrating or confusing